Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tube1Q9D6T1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Tube1Q9D6T1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Tube1Q9D6T1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Celf4-206ENSMUST00000224553 1729 ntBASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Gm13616-201ENSMUST00000120600 222 ntBASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Gm18889-201ENSMUST00000174284 929 ntBASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Mir6990-201ENSMUST00000183724 91 ntBASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Gm2272-201ENSMUST00000194903 582 ntBASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.39■□□□□ 0.21
Tube1Q9D6T1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Gm10154-201ENSMUST00000084445 354 ntBASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tube1Q9D6T1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.38■□□□□ 0.21
Tube1Q9D6T1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tube1Q9D6T1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tube1Q9D6T1 Carlr-201ENSMUST00000181515 2574 ntBASIC16.37■□□□□ 0.21
Tube1Q9D6T1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.37■□□□□ 0.21
Tube1Q9D6T1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tube1Q9D6T1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tube1Q9D6T1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tube1Q9D6T1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tube1Q9D6T1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tube1Q9D6T1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms