Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.19■□□□□ 0.18
Cfap53Q9D439 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Gm13597-201ENSMUST00000121239 375 ntBASIC16.19■□□□□ 0.18
Cfap53Q9D439 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Gm5364-201ENSMUST00000216789 889 ntBASIC16.19■□□□□ 0.18
Cfap53Q9D439 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.19■□□□□ 0.18
Cfap53Q9D439 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap53Q9D439 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.19■□□□□ 0.18
Cfap53Q9D439 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.18■□□□□ 0.18
Cfap53Q9D439 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap53Q9D439 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.18■□□□□ 0.18
Cfap53Q9D439 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cfap53Q9D439 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Gm2272-201ENSMUST00000194903 582 ntBASIC16.17■□□□□ 0.18
Cfap53Q9D439 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Gm18206-201ENSMUST00000207027 926 ntBASIC16.17■□□□□ 0.18
Cfap53Q9D439 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cfap53Q9D439 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms