Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hdhd3Q9CYW4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Hdhd3Q9CYW4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hdhd3Q9CYW4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hdhd3Q9CYW4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hdhd3Q9CYW4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hdhd3Q9CYW4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hdhd3Q9CYW4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hdhd3Q9CYW4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hdhd3Q9CYW4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Gm8344-201ENSMUST00000119813 856 ntBASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hdhd3Q9CYW4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Mir3081-201ENSMUST00000175305 84 ntBASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Gm29518-201ENSMUST00000190858 372 ntBASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Gm7506-201ENSMUST00000207758 815 ntBASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hdhd3Q9CYW4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms