Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1lQ9CXF7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Gm27867-201ENSMUST00000184778 125 ntBASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1lQ9CXF7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Gm15165-201ENSMUST00000118140 502 ntBASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Chd1lQ9CXF7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1lQ9CXF7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms