Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Mir449b-201ENSMUST00000104833 80 ntBASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Gm2810-201ENSMUST00000118681 990 ntBASIC13.94□□□□□ -0.18
Otud1Q9CUB6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Gm7774-201ENSMUST00000200064 533 ntBASIC13.94□□□□□ -0.18
Otud1Q9CUB6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Gm5779-201ENSMUST00000218467 910 ntBASIC13.94□□□□□ -0.18
Otud1Q9CUB6 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Otud1Q9CUB6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Gm22065-201ENSMUST00000103753 110 ntBASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Gm22066-201ENSMUST00000103761 110 ntBASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Gm24932-201ENSMUST00000103763 110 ntBASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Gm24115-201ENSMUST00000103799 110 ntBASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Gm22190-201ENSMUST00000103827 110 ntBASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Gm22191-201ENSMUST00000103831 110 ntBASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Gm24721-201ENSMUST00000103849 110 ntBASIC13.93□□□□□ -0.18
Otud1Q9CUB6 Gm28018-201ENSMUST00000103869 110 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms