Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1aQ9CU62 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1aQ9CU62 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1aQ9CU62 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.53■□□□□ 0.24
Smc1aQ9CU62 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1aQ9CU62 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1aQ9CU62 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc1aQ9CU62 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Smc1aQ9CU62 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.52■□□□□ 0.24
Smc1aQ9CU62 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc1aQ9CU62 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc1aQ9CU62 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Gm14701-201ENSMUST00000117156 348 ntBASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1aQ9CU62 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Smc1aQ9CU62 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms