Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTRAFQ9CQE8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
RTRAFQ9CQE8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.02□□□□□ -0.49
RTRAFQ9CQE8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTRAFQ9CQE8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTRAFQ9CQE8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTRAFQ9CQE8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTRAFQ9CQE8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTRAFQ9CQE8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTRAFQ9CQE8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTRAFQ9CQE8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
RTRAFQ9CQE8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RTRAFQ9CQE8 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTRAFQ9CQE8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12□□□□□ -0.49
RTRAFQ9CQE8 Carlr-201ENSMUST00000181515 2574 ntBASIC12□□□□□ -0.49
RTRAFQ9CQE8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Gm30025-201ENSMUST00000218555 728 ntBASIC12□□□□□ -0.49
RTRAFQ9CQE8 AC160980.1-201ENSMUST00000224136 970 ntBASIC12□□□□□ -0.49
RTRAFQ9CQE8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RTRAFQ9CQE8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms