Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm21362-201ENSMUST00000194272 928 ntBASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nipsnap3bQ9CQE1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nipsnap3bQ9CQE1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm7222-201ENSMUST00000117512 906 ntBASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm23547-201ENSMUST00000158210 271 ntBASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm27459-201ENSMUST00000184860 107 ntBASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms