Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Gm26039-201ENSMUST00000158152 144 ntBASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Arhgef4-208ENSMUST00000211073 171 ntBASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Gm38197-201ENSMUST00000192320 2122 ntBASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39lQ9CQD0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Gm43364-201ENSMUST00000196046 3274 ntBASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Gm29994-201ENSMUST00000195495 1193 ntBASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39lQ9CQD0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 AC135637.1-201ENSMUST00000227750 365 ntBASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Rpl39lQ9CQD0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms