Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac9Q99N13 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hdac9Q99N13 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Hdac9Q99N13 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.31■□□□□ 0.36
Hdac9Q99N13 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac9Q99N13 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac9Q99N13 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hdac9Q99N13 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.31■□□□□ 0.36
Hdac9Q99N13 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.31■□□□□ 0.36
Hdac9Q99N13 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac9Q99N13 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Gm11478-201ENSMUST00000117851 599 ntBASIC17.3■□□□□ 0.36
Hdac9Q99N13 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac9Q99N13 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Gm9522-201ENSMUST00000182394 926 ntBASIC17.3■□□□□ 0.36
Hdac9Q99N13 Gm18018-201ENSMUST00000198273 408 ntBASIC17.3■□□□□ 0.36
Hdac9Q99N13 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Gm6180-201ENSMUST00000065243 498 ntBASIC17.3■□□□□ 0.36
Hdac9Q99N13 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.3■□□□□ 0.36
Hdac9Q99N13 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac9Q99N13 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Dancr-204ENSMUST00000132389 2347 ntBASIC17.29■□□□□ 0.36
Hdac9Q99N13 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Gm22189-201ENSMUST00000103822 86 ntBASIC17.29■□□□□ 0.36
Hdac9Q99N13 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Gm8749-201ENSMUST00000117737 331 ntBASIC17.29■□□□□ 0.36
Hdac9Q99N13 Gm14042-201ENSMUST00000120139 833 ntBASIC17.29■□□□□ 0.36
Hdac9Q99N13 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac9Q99N13 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Gm12091-201ENSMUST00000146791 830 ntBASIC17.28■□□□□ 0.36
Hdac9Q99N13 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Hdac9Q99N13 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Gm45384-201ENSMUST00000210451 277 ntBASIC17.28■□□□□ 0.36
Hdac9Q99N13 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.28■□□□□ 0.36
Hdac9Q99N13 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Hdac9Q99N13 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac9Q99N13 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac9Q99N13 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac9Q99N13 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac9Q99N13 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Hdac9Q99N13 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac9Q99N13 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac9Q99N13 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac9Q99N13 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac9Q99N13 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac9Q99N13 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.27■□□□□ 0.36
Hdac9Q99N13 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac9Q99N13 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac9Q99N13 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Hdac9Q99N13 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms