Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.95□□□□□ -0.34
Scrt1Q99M85 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.95□□□□□ -0.34
Scrt1Q99M85 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Gm15693-201ENSMUST00000120470 637 ntBASIC12.94□□□□□ -0.34
Scrt1Q99M85 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Gm10499-201ENSMUST00000174094 934 ntBASIC12.94□□□□□ -0.34
Scrt1Q99M85 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scrt1Q99M85 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Gm8410-201ENSMUST00000117225 605 ntBASIC12.93□□□□□ -0.34
Scrt1Q99M85 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.93□□□□□ -0.34
Scrt1Q99M85 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Syt7-205ENSMUST00000224135 1557 ntBASIC12.93□□□□□ -0.34
Scrt1Q99M85 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scrt1Q99M85 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms