Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
Chmp1b1Q99LU0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Gm13036-201ENSMUST00000117799 748 ntBASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Mir5126-201ENSMUST00000175513 77 ntBASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1b1Q99LU0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp1b1Q99LU0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp1b1Q99LU0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Chmp1b1Q99LU0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp1b1Q99LU0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Chmp1b1Q99LU0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp1b1Q99LU0 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1b1Q99LU0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms