Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.84■□□□□ 0.61
Usp16Q99LG0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Gm24158-201ENSMUST00000175263 71 ntBASIC18.84■□□□□ 0.61
Usp16Q99LG0 Gm25948-201ENSMUST00000175334 112 ntBASIC18.84■□□□□ 0.61
Usp16Q99LG0 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.84■□□□□ 0.61
Usp16Q99LG0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.84■□□□□ 0.61
Usp16Q99LG0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Usp16Q99LG0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp16Q99LG0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp16Q99LG0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp16Q99LG0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp16Q99LG0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp16Q99LG0 Gm13616-201ENSMUST00000120600 222 ntBASIC18.83■□□□□ 0.6
Usp16Q99LG0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp16Q99LG0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.6
Usp16Q99LG0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp16Q99LG0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp16Q99LG0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.83■□□□□ 0.6
Usp16Q99LG0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.83■□□□□ 0.6
Usp16Q99LG0 Gm7774-201ENSMUST00000200064 533 ntBASIC18.83■□□□□ 0.6
Usp16Q99LG0 Gm45098-201ENSMUST00000207179 657 ntBASIC18.83■□□□□ 0.6
Usp16Q99LG0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp16Q99LG0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp16Q99LG0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp16Q99LG0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp16Q99LG0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp16Q99LG0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Usp16Q99LG0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp16Q99LG0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.82■□□□□ 0.6
Usp16Q99LG0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Gm10253-201ENSMUST00000194270 940 ntBASIC18.82■□□□□ 0.6
Usp16Q99LG0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Gm5779-201ENSMUST00000218467 910 ntBASIC18.82■□□□□ 0.6
Usp16Q99LG0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.82■□□□□ 0.6
Usp16Q99LG0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Usp16Q99LG0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.81■□□□□ 0.6
Usp16Q99LG0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Gm13015-201ENSMUST00000118674 204 ntBASIC18.81■□□□□ 0.6
Usp16Q99LG0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.81■□□□□ 0.6
Usp16Q99LG0 Olfr286-202ENSMUST00000205305 969 ntBASIC18.81■□□□□ 0.6
Usp16Q99LG0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp16Q99LG0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp16Q99LG0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Usp16Q99LG0 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.8■□□□□ 0.6
Usp16Q99LG0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp16Q99LG0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp16Q99LG0 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.8■□□□□ 0.6
Usp16Q99LG0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms