Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Shd-206ENSMUST00000225145 998 ntBASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf1Q99LC2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Gm9719-201ENSMUST00000162765 543 ntBASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Gm44719-201ENSMUST00000206404 149 ntBASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Gm20445-201ENSMUST00000061905 565 ntBASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf1Q99LC2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Gm15824-201ENSMUST00000119516 955 ntBASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.72□□□□□ -0.05
Cstf1Q99LC2 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Gm9899-201ENSMUST00000065519 555 ntBASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cstf1Q99LC2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms