Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Grk6-207ENSMUST00000225925 2769 ntBASIC14.89□□□□□ -0.03
Cdk9Q99J95 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.89□□□□□ -0.03
Cdk9Q99J95 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk9Q99J95 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Olfr129-201ENSMUST00000122318 993 ntBASIC14.88□□□□□ -0.03
Cdk9Q99J95 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk9Q99J95 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Mir3081-201ENSMUST00000175305 84 ntBASIC14.87□□□□□ -0.03
Cdk9Q99J95 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Gm27357-201ENSMUST00000183754 135 ntBASIC14.87□□□□□ -0.03
Cdk9Q99J95 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.87□□□□□ -0.03
Cdk9Q99J95 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk9Q99J95 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk9Q99J95 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms