Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.38■□□□□ 0.37
Col20a1Q923P0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.38■□□□□ 0.37
Col20a1Q923P0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col20a1Q923P0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Gm6222-201ENSMUST00000120787 396 ntBASIC17.37■□□□□ 0.37
Col20a1Q923P0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Gm27989-201ENSMUST00000184721 107 ntBASIC17.37■□□□□ 0.37
Col20a1Q923P0 Gm44344-201ENSMUST00000200287 129 ntBASIC17.37■□□□□ 0.37
Col20a1Q923P0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.37■□□□□ 0.37
Col20a1Q923P0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col20a1Q923P0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Gm9063-201ENSMUST00000223299 582 ntBASIC17.36■□□□□ 0.37
Col20a1Q923P0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.36■□□□□ 0.37
Col20a1Q923P0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col20a1Q923P0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Col20a1Q923P0 Gm12428-201ENSMUST00000119844 727 ntBASIC17.35■□□□□ 0.37
Col20a1Q923P0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms