Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Gm2810-201ENSMUST00000118681 990 ntBASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Gm13464-201ENSMUST00000119418 935 ntBASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha11Q91Y19 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Gm38225-201ENSMUST00000194001 393 ntBASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha11Q91Y19 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms