Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb1Q91Y08 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb1Q91Y08 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb1Q91Y08 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb1Q91Y08 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb1Q91Y08 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Mir8117-201ENSMUST00000184773 107 ntBASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Gm2451-201ENSMUST00000199447 999 ntBASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Gm10290-201ENSMUST00000200451 999 ntBASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms