Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga3Q91XY5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Gm2651-201ENSMUST00000203560 838 ntBASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Gm15590-201ENSMUST00000078419 552 ntBASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga3Q91XY5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Gm18733-201ENSMUST00000173950 856 ntBASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga3Q91XY5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Gm12350-201ENSMUST00000121208 462 ntBASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms