Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx41Q91VN6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx41Q91VN6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx41Q91VN6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx41Q91VN6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.94■□□□□ 0.3
Ddx41Q91VN6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx41Q91VN6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx41Q91VN6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx41Q91VN6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.94■□□□□ 0.3
Ddx41Q91VN6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx41Q91VN6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx41Q91VN6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Gm18889-201ENSMUST00000174284 929 ntBASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx41Q91VN6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.92■□□□□ 0.3
Ddx41Q91VN6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Gm10154-201ENSMUST00000084445 354 ntBASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.92■□□□□ 0.3
Ddx41Q91VN6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Gm43474-201ENSMUST00000196415 774 ntBASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Gm44872-201ENSMUST00000207864 420 ntBASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms