Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.23■□□□□ 0.35
StrcQ8VIM6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Gm7584-201ENSMUST00000175829 940 ntBASIC17.23■□□□□ 0.35
StrcQ8VIM6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.23■□□□□ 0.35
StrcQ8VIM6 Gm18473-201ENSMUST00000220543 868 ntBASIC17.23■□□□□ 0.35
StrcQ8VIM6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.23■□□□□ 0.35
StrcQ8VIM6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Mir497b-201ENSMUST00000093601 125 ntBASIC17.23■□□□□ 0.35
StrcQ8VIM6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.23■□□□□ 0.35
StrcQ8VIM6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.23■□□□□ 0.35
StrcQ8VIM6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
StrcQ8VIM6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
StrcQ8VIM6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
StrcQ8VIM6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
StrcQ8VIM6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
StrcQ8VIM6 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.22■□□□□ 0.35
StrcQ8VIM6 Gm27331-201ENSMUST00000183705 60 ntBASIC17.22■□□□□ 0.35
StrcQ8VIM6 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.22■□□□□ 0.35
StrcQ8VIM6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
StrcQ8VIM6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
StrcQ8VIM6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
StrcQ8VIM6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
StrcQ8VIM6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
StrcQ8VIM6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
StrcQ8VIM6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
StrcQ8VIM6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.22■□□□□ 0.35
StrcQ8VIM6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
StrcQ8VIM6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
StrcQ8VIM6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.21■□□□□ 0.35
StrcQ8VIM6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Gm6013-201ENSMUST00000212264 699 ntBASIC17.21■□□□□ 0.35
StrcQ8VIM6 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.21■□□□□ 0.35
StrcQ8VIM6 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.21■□□□□ 0.35
StrcQ8VIM6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
StrcQ8VIM6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
StrcQ8VIM6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
StrcQ8VIM6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
StrcQ8VIM6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
StrcQ8VIM6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
StrcQ8VIM6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Gm26083-201ENSMUST00000157904 193 ntBASIC17.2■□□□□ 0.34
StrcQ8VIM6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Gm27516-201ENSMUST00000184237 98 ntBASIC17.2■□□□□ 0.34
StrcQ8VIM6 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.2■□□□□ 0.34
StrcQ8VIM6 Gm24526-201ENSMUST00000082921 158 ntBASIC17.2■□□□□ 0.34
StrcQ8VIM6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms