Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.37□□□□□ -0.43
H1fooQ8VIK3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
H1fooQ8VIK3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Mir5126-201ENSMUST00000175513 77 ntBASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
H1fooQ8VIK3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Gm27628-201ENSMUST00000184911 107 ntBASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.35□□□□□ -0.43
H1fooQ8VIK3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms