Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Gm38294-201ENSMUST00000192831 381 ntBASIC15.68■□□□□ 0.1
TraipQ8VIG6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.68■□□□□ 0.1
TraipQ8VIG6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Gm44344-201ENSMUST00000200287 129 ntBASIC15.67■□□□□ 0.1
TraipQ8VIG6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Gm7775-201ENSMUST00000218871 853 ntBASIC15.67■□□□□ 0.1
TraipQ8VIG6 Gm16476-201ENSMUST00000221544 139 ntBASIC15.67■□□□□ 0.1
TraipQ8VIG6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TraipQ8VIG6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TraipQ8VIG6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Gm27437-201ENSMUST00000183429 107 ntBASIC15.66■□□□□ 0.1
TraipQ8VIG6 Mir6977-201ENSMUST00000184960 64 ntBASIC15.66■□□□□ 0.1
TraipQ8VIG6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TraipQ8VIG6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Gm6222-201ENSMUST00000120787 396 ntBASIC15.65■□□□□ 0.1
TraipQ8VIG6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms