Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Gm45098-201ENSMUST00000207179 657 ntBASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lmcd1Q8VEE1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Olfr582-201ENSMUST00000098212 960 ntBASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lmcd1Q8VEE1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Gm27839-201ENSMUST00000184242 106 ntBASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Gm43179-201ENSMUST00000198797 275 ntBASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Lmcd1Q8VEE1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lmcd1Q8VEE1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lmcd1Q8VEE1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Lmcd1Q8VEE1 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.63■□□□□ 0.09
Lmcd1Q8VEE1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lmcd1Q8VEE1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.63■□□□□ 0.09
Lmcd1Q8VEE1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Lmcd1Q8VEE1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms