Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Gm14722-201ENSMUST00000118943 689 ntBASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Gm6443-201ENSMUST00000203599 874 ntBASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf8Q8VC56 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Gm12350-201ENSMUST00000121208 462 ntBASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.24□□□□□ -0.13
Rnf8Q8VC56 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rnf8Q8VC56 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.23□□□□□ -0.13
Rnf8Q8VC56 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Gm37153-201ENSMUST00000193637 231 ntBASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Gm43514-201ENSMUST00000198852 424 ntBASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms