Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Gm37055-201ENSMUST00000191866 133 ntBASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Gm7791-201ENSMUST00000219066 539 ntBASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc9Q8VC31 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Gm5417-201ENSMUST00000079706 384 ntBASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc9Q8VC31 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Ntrk2-204ENSMUST00000224259 3049 ntBASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc9Q8VC31 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc9Q8VC31 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc9Q8VC31 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc9Q8VC31 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.77■□□□□ 0.43
Ccdc9Q8VC31 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc9Q8VC31 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Ccdc9Q8VC31 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc9Q8VC31 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Gm27194-201ENSMUST00000175753 2936 ntBASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Gm37861-201ENSMUST00000193534 2869 ntBASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc9Q8VC31 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms