Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Gm10231-201ENSMUST00000181584 441 ntBASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Mir6982-201ENSMUST00000184354 68 ntBASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Gm10175-202ENSMUST00000208752 441 ntBASIC12.05□□□□□ -0.48
Nup35Q8R4R6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Gm8097-201ENSMUST00000117903 829 ntBASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup35Q8R4R6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup35Q8R4R6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms