Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp2a1Q8R429 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Atp2a1Q8R429 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atp2a1Q8R429 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Atp2a1Q8R429 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Atp2a1Q8R429 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Atp2a1Q8R429 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Atp2a1Q8R429 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.46■□□□□ 0.22
Atp2a1Q8R429 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Gm25144-201ENSMUST00000179561 110 ntBASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Gm25352-201ENSMUST00000179815 110 ntBASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Gm28630-201ENSMUST00000187806 498 ntBASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp2a1Q8R429 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms