Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm11355-201ENSMUST00000121120 306 ntBASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Grk6-205ENSMUST00000224653 2976 ntBASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Gm13559-201ENSMUST00000120476 863 ntBASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Gm8318-201ENSMUST00000182954 872 ntBASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Gm37055-201ENSMUST00000191866 133 ntBASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Gm45058-201ENSMUST00000205810 766 ntBASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf4Q8K4J2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Ebf4Q8K4J2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf4Q8K4J2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf4Q8K4J2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf4Q8K4J2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf4Q8K4J2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf4Q8K4J2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf4Q8K4J2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Ebf4Q8K4J2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf4Q8K4J2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf4Q8K4J2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Gm15565-201ENSMUST00000118890 427 ntBASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms