Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.92□□□□□ -0.18
Clrn1Q8K445 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Gm11779-201ENSMUST00000118541 368 ntBASIC13.92□□□□□ -0.18
Clrn1Q8K445 Gm15467-201ENSMUST00000120582 445 ntBASIC13.92□□□□□ -0.18
Clrn1Q8K445 Mir3113-201ENSMUST00000175478 76 ntBASIC13.92□□□□□ -0.18
Clrn1Q8K445 Gm27301-201ENSMUST00000184012 127 ntBASIC13.92□□□□□ -0.18
Clrn1Q8K445 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Gm27525-201ENSMUST00000184465 107 ntBASIC13.92□□□□□ -0.18
Clrn1Q8K445 Mir8117-201ENSMUST00000184773 107 ntBASIC13.92□□□□□ -0.18
Clrn1Q8K445 Gm17968-201ENSMUST00000194902 784 ntBASIC13.92□□□□□ -0.18
Clrn1Q8K445 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.92□□□□□ -0.18
Clrn1Q8K445 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.92□□□□□ -0.18
Clrn1Q8K445 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn1Q8K445 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.91□□□□□ -0.18
Clrn1Q8K445 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Gm44492-201ENSMUST00000197012 141 ntBASIC13.91□□□□□ -0.18
Clrn1Q8K445 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.91□□□□□ -0.18
Clrn1Q8K445 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.91□□□□□ -0.18
Clrn1Q8K445 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn1Q8K445 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.9□□□□□ -0.18
Clrn1Q8K445 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.9□□□□□ -0.18
Clrn1Q8K445 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Gm8000-201ENSMUST00000188378 592 ntBASIC13.9□□□□□ -0.18
Clrn1Q8K445 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.9□□□□□ -0.18
Clrn1Q8K445 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.9□□□□□ -0.18
Clrn1Q8K445 Gm45747-201ENSMUST00000212203 999 ntBASIC13.9□□□□□ -0.18
Clrn1Q8K445 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 153 ms