Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Gm12928-201ENSMUST00000117115 573 ntBASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rp1l1Q8CGM2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rp1l1Q8CGM2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rp1l1Q8CGM2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Rp1l1Q8CGM2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rp1l1Q8CGM2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Rp1l1Q8CGM2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rp1l1Q8CGM2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.05■□□□□ 0
Rp1l1Q8CGM2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Gm4804-201ENSMUST00000182234 999 ntBASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Gm38241-201ENSMUST00000192641 898 ntBASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Gm7399-201ENSMUST00000032395 858 ntBASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rp1l1Q8CGM2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.04■□□□□ -0
Rp1l1Q8CGM2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Gm43094-201ENSMUST00000196549 921 ntBASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.04■□□□□ -0
Rp1l1Q8CGM2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rp1l1Q8CGM2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.03■□□□□ -0
Rp1l1Q8CGM2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms