Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Gm7230-201ENSMUST00000173026 815 ntBASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Gm6089-201ENSMUST00000197666 938 ntBASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc87Q8CDL9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc87Q8CDL9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc87Q8CDL9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc87Q8CDL9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc87Q8CDL9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc87Q8CDL9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc87Q8CDL9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc87Q8CDL9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc87Q8CDL9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc87Q8CDL9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc87Q8CDL9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc87Q8CDL9 Gm10499-201ENSMUST00000174094 934 ntBASIC15.64■□□□□ 0.09
Ccdc87Q8CDL9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.64■□□□□ 0.09
Ccdc87Q8CDL9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc87Q8CDL9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms