Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rft1Q8C3B8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Gm18622-201ENSMUST00000219361 595 ntBASIC13.19□□□□□ -0.3
Rft1Q8C3B8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rft1Q8C3B8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.18□□□□□ -0.3
Rft1Q8C3B8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rft1Q8C3B8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Rubie-203ENSMUST00000227803 2430 ntBASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Gm25990-201ENSMUST00000102440 86 ntBASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Gm18733-201ENSMUST00000173950 856 ntBASIC13.17□□□□□ -0.3
Rft1Q8C3B8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Gm10060-201ENSMUST00000212002 111 ntBASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rft1Q8C3B8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms