Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Rprl3-201ENSMUST00000157400 290 ntBASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tsen54Q8C2A2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Gm6257-201ENSMUST00000163864 910 ntBASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
Tsen54Q8C2A2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms