Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Gm8566-201ENSMUST00000120174 465 ntBASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Gm5523-201ENSMUST00000180415 997 ntBASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.5□□□□□ -0.57
Chd9Q8BYH8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd9Q8BYH8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Gm16505-201ENSMUST00000179981 232 ntBASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Gm8652-201ENSMUST00000181363 964 ntBASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd9Q8BYH8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Gm45880-201ENSMUST00000213041 853 ntBASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Gm10012-201ENSMUST00000078252 192 ntBASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd9Q8BYH8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Gm46209-201ENSMUST00000217912 553 ntBASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Gm19309-201ENSMUST00000218295 205 ntBASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd9Q8BYH8 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms