Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Gm45167-201ENSMUST00000208007 322 ntBASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 AV026068-213ENSMUST00000223675 1171 ntBASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsfm13Q8BXS2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Efs-202ENSMUST00000227037 2540 ntBASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsfm13Q8BXS2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Gm18195-201ENSMUST00000207604 706 ntBASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Tnfsfm13Q8BXS2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsfm13Q8BXS2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms