Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.27□□□□□ -0.12
Cpne3Q8BT60 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Gm6550-201ENSMUST00000187574 993 ntBASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cpne3Q8BT60 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Gm17971-201ENSMUST00000190239 806 ntBASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpne3Q8BT60 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms