Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm44357-201ENSMUST00000195897 142 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm19658-201ENSMUST00000196231 138 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm44367-201ENSMUST00000196836 138 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm44350-201ENSMUST00000197197 138 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm44390-201ENSMUST00000197533 144 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm44313-201ENSMUST00000198018 138 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm44486-201ENSMUST00000198508 138 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm44314-201ENSMUST00000199263 138 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm44394-201ENSMUST00000199558 138 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm44484-201ENSMUST00000199873 138 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm44466-201ENSMUST00000200264 138 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm44359-201ENSMUST00000200671 138 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm6296-201ENSMUST00000222599 943 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm14780-201ENSMUST00000118387 2737 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm38318-201ENSMUST00000195769 1706 ntBASIC14□□□□□ -0.17
Ckap4Q8BMK4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ckap4Q8BMK4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14□□□□□ -0.17
Ckap4Q8BMK4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Gm25990-201ENSMUST00000102440 86 ntBASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Gm7222-201ENSMUST00000117512 906 ntBASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ckap4Q8BMK4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Gm27646-201ENSMUST00000183989 110 ntBASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ckap4Q8BMK4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms