Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf18Q8BM39 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Gm19164-201ENSMUST00000210667 640 ntBASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Prpf18Q8BM39 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Gm12008-201ENSMUST00000117791 755 ntBASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Gm12497-201ENSMUST00000138778 237 ntBASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Gm25745-201ENSMUST00000174945 133 ntBASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Gm27357-201ENSMUST00000183754 135 ntBASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf18Q8BM39 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf18Q8BM39 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms