Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trpa1Q8BLA8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trpa1Q8BLA8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trpa1Q8BLA8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trpa1Q8BLA8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trpa1Q8BLA8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trpa1Q8BLA8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Gm12008-201ENSMUST00000117791 755 ntBASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trpa1Q8BLA8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trpa1Q8BLA8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trpa1Q8BLA8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trpa1Q8BLA8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trpa1Q8BLA8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trpa1Q8BLA8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trpa1Q8BLA8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trpa1Q8BLA8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trpa1Q8BLA8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trpa1Q8BLA8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trpa1Q8BLA8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trpa1Q8BLA8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms