Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcal1Q8BJL0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Dupd1-202ENSMUST00000224735 548 ntBASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcal1Q8BJL0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Mir1897-201ENSMUST00000122581 272 ntBASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Gm27631-201ENSMUST00000184163 466 ntBASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Gm29667-201ENSMUST00000190817 490 ntBASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Gm46209-201ENSMUST00000217912 553 ntBASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcal1Q8BJL0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcal1Q8BJL0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms