Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.33■□□□□ 0.36
Samm50Q8BGH2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Gm4899-201ENSMUST00000178708 719 ntBASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samm50Q8BGH2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Gm11779-201ENSMUST00000118541 368 ntBASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Gm15467-201ENSMUST00000120582 445 ntBASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Samm50Q8BGH2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Gm9727-201ENSMUST00000161387 555 ntBASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Gm5264-201ENSMUST00000190584 848 ntBASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Samm50Q8BGH2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms