Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trnp1Q80ZI1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Gm13226-201ENSMUST00000117838 404 ntBASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Gm10275-202ENSMUST00000168697 495 ntBASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Gm27839-201ENSMUST00000184242 106 ntBASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Gm10275-201ENSMUST00000092620 635 ntBASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trnp1Q80ZI1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Trnp1Q80ZI1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Gm13392-201ENSMUST00000117708 150 ntBASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
Trnp1Q80ZI1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms