Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf40bQ80W14 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf40bQ80W14 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf40bQ80W14 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf40bQ80W14 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf40bQ80W14 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Prpf40bQ80W14 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf40bQ80W14 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Prpf40bQ80W14 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.02■□□□□ 0.31
Prpf40bQ80W14 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf40bQ80W14 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf40bQ80W14 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.02■□□□□ 0.31
Prpf40bQ80W14 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf40bQ80W14 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Gm9824-201ENSMUST00000178707 561 ntBASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.01■□□□□ 0.31
Prpf40bQ80W14 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Gm25857-201ENSMUST00000082788 129 ntBASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf40bQ80W14 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17■□□□□ 0.31
Prpf40bQ80W14 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17■□□□□ 0.31
Prpf40bQ80W14 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17■□□□□ 0.31
Prpf40bQ80W14 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17■□□□□ 0.31
Prpf40bQ80W14 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Prpf40bQ80W14 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17■□□□□ 0.31
Prpf40bQ80W14 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Prpf40bQ80W14 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf40bQ80W14 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf40bQ80W14 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms