Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.64□□□□□ -0.23
Pif1Q80SX8 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.64□□□□□ -0.23
Pif1Q80SX8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.63□□□□□ -0.23
Pif1Q80SX8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Gm27920-201ENSMUST00000183953 96 ntBASIC13.63□□□□□ -0.23
Pif1Q80SX8 Gm18049-201ENSMUST00000208909 581 ntBASIC13.63□□□□□ -0.23
Pif1Q80SX8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.63□□□□□ -0.23
Pif1Q80SX8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Pif1Q80SX8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pif1Q80SX8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.62□□□□□ -0.23
Pif1Q80SX8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.62□□□□□ -0.23
Pif1Q80SX8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pif1Q80SX8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.62□□□□□ -0.23
Pif1Q80SX8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.61□□□□□ -0.23
Pif1Q80SX8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.61□□□□□ -0.23
Pif1Q80SX8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.61□□□□□ -0.23
Pif1Q80SX8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms