Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn4bQ7M729 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.38□□□□□ -0.11
Scn4bQ7M729 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn4bQ7M729 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.37□□□□□ -0.11
Scn4bQ7M729 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.37□□□□□ -0.11
Scn4bQ7M729 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.37□□□□□ -0.11
Scn4bQ7M729 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn4bQ7M729 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Gm2272-201ENSMUST00000194903 582 ntBASIC14.36□□□□□ -0.11
Scn4bQ7M729 Gm43514-201ENSMUST00000198852 424 ntBASIC14.36□□□□□ -0.11
Scn4bQ7M729 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.36□□□□□ -0.11
Scn4bQ7M729 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn4bQ7M729 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Gm12134-201ENSMUST00000122109 520 ntBASIC14.35□□□□□ -0.11
Scn4bQ7M729 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Scn4bQ7M729 AW822252-206ENSMUST00000208904 237 ntBASIC14.35□□□□□ -0.11
Scn4bQ7M729 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn4bQ7M729 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn4bQ7M729 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms