Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Gm27622-201ENSMUST00000183779 60 ntBASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Gm2451-201ENSMUST00000199447 999 ntBASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Gm10290-201ENSMUST00000200451 999 ntBASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Gm9182-201ENSMUST00000217829 639 ntBASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
Ubfd1Q78JW9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Gm25144-201ENSMUST00000179561 110 ntBASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Gm25352-201ENSMUST00000179815 110 ntBASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Gm18766-201ENSMUST00000189811 808 ntBASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubfd1Q78JW9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 BC037039-201ENSMUST00000192003 2205 ntBASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Gm14057-201ENSMUST00000120631 482 ntBASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Gm9726-201ENSMUST00000180321 678 ntBASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Gm20949-201ENSMUST00000206478 952 ntBASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms