Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Gm10175-201ENSMUST00000086013 645 ntBASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Lsm8Q6ZWM4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Gm27525-201ENSMUST00000184465 107 ntBASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Gm9182-201ENSMUST00000217829 639 ntBASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Lsm8Q6ZWM4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Gm8000-201ENSMUST00000188378 592 ntBASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm8Q6ZWM4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Gm15483-201ENSMUST00000120338 456 ntBASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
Lsm8Q6ZWM4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms