Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm9229-201ENSMUST00000222777 126 ntBASIC12.4□□□□□ -0.42
Rif1Q6PR54 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm26083-201ENSMUST00000157904 193 ntBASIC12.4□□□□□ -0.42
Rif1Q6PR54 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm43058-201ENSMUST00000197645 625 ntBASIC12.4□□□□□ -0.42
Rif1Q6PR54 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm6091-201ENSMUST00000098307 165 ntBASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.4□□□□□ -0.43
Rif1Q6PR54 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Rif1Q6PR54 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rif1Q6PR54 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.39□□□□□ -0.43
Rif1Q6PR54 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.39□□□□□ -0.43
Rif1Q6PR54 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.39□□□□□ -0.43
Rif1Q6PR54 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Gm38002-201ENSMUST00000193255 180 ntBASIC12.39□□□□□ -0.43
Rif1Q6PR54 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rif1Q6PR54 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Gm29127-201ENSMUST00000188304 517 ntBASIC12.38□□□□□ -0.43
Rif1Q6PR54 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.38□□□□□ -0.43
Rif1Q6PR54 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.38□□□□□ -0.43
Rif1Q6PR54 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Gm38341-201ENSMUST00000195357 515 ntBASIC12.38□□□□□ -0.43
Rif1Q6PR54 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.38□□□□□ -0.43
Rif1Q6PR54 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.38□□□□□ -0.43
Rif1Q6PR54 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms