Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Rnf220Q6PDX6 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Gm9013-201ENSMUST00000132939 882 ntBASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Mir6404-201ENSMUST00000183699 94 ntBASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Mir6982-201ENSMUST00000184354 68 ntBASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf220Q6PDX6 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Carlr-201ENSMUST00000181515 2574 ntBASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Rnf220Q6PDX6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Mir770-201ENSMUST00000103252 94 ntBASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rnf220Q6PDX6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Grk6-205ENSMUST00000224653 2976 ntBASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Rnf220Q6PDX6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms